Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPMQVLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTAD-GELNI-EDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQH----GAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKML-GPTGIGVLFGKRELLQKMEPIEFGGDMIDF-VSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGF-DAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDV-HPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDIDQLINALKQTKEFFSYEF |
1ELU Chain:A ((10-388)) | -------------QFPGLA------NKTYFNFGGQGILPTVALEAITAMYGYLQENG-PFSIAANQHIQQLIAQLRQALAETFNVD-PNTITITDNVTTGCDIVLWGLD---WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSA-PQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA-----------DPDCIRACCHYITDEEEINHLLARLADF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ELU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195976 for 3138 contacts (-62.5/contact) +
2D Compatibility (PS) -39786 + (NN) -13008 + (LL) 3096
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -270474.0 ( -86.19 by residue)
QMean score : 0.511
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