Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILFNYDRLSQYDLTMKISREQSIVSRWIKKLVLKGYITSQQSSEDLRCKELILTDQARTLISQINNARCELIEARCQCLSEVELDNLNQLLDKLNQRRISL
2RDP Chain:A ((14-149))
--AELEKLLRYIAANLKQRGREILTNYPITPPQFVALQWLLEEGDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEH---VVRIRLLEKGERIIEEVIEKRQRDLANVLESFSDEEIVVFERCLRKLHQEMTK-
General information:
TITO was launched using:
RESULT:
Template:
2RDP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50371 for 807 contacts (-62.4/contact) +
2D Compatibility (PS) -14546 + (NN) -8541 + (LL) 676
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -81232.0 ( -100.66 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2RDP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RDP-query.scw
PDB file :
Tito_Scwrl_2RDP.pdb
: