Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDLPIIALDFESKEKVNQFLDLFD-ESLFVKVGMELFYQEGPQLINEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKHNQHT--K-IIAVTQLTSTTEDMLRHEQNIQTSIEEAVLNYAKLANAAGLDGVVCSPLESRMLTEKLGTSFLKVTPGIRPKGASQDDQHRITTPEEARQLGSTHIVVGRPITQSDNPVESYHKIKESWLV
1EIX Chain:A ((14-242))
-NSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVP--FGKDAPLLIAVTVLTSMEASDLV-DLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ-
General information:
TITO was launched using:
RESULT:
Template:
1EIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115750 for 1924 contacts (-60.2/contact) +
2D Compatibility (PS) -24618 + (NN) -11587 + (LL) 408
1D Compatibility (HY) -14000 + (ID) 4650
Total energy: -170197.0 ( -88.46 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_1EIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EIX-query.scw
PDB file :
Tito_Scwrl_1EIX.pdb
: