Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKAERQNLIITAIQQNKKMTALELAKYC-----NVSKRTILRDIDDLENQGVKIYAHYGKNGGYQIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLKRMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHWHAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS |
2P5K Chain:A ((2-48)) | -NKGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2P5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -9311 for 236 contacts (-39.5/contact) +
2D Compatibility (PS) -4815 + (NN) -3043 + (LL) 14500
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -5019.0 ( -21.27 by residue)
QMean score : 0.689
|
|
|