Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLETITLAHIYEEQGFFEEALQIYTNILKKTPDNTEA--------------LKQMKRLEKIQKNCAPFKHDALLKQHYLNFI-KGDRLS-VENLEKWLVEWN
3GYZ Chain:A ((41-132))
------SYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN-DYTPV-FHTGQCQLRLKAPLKAKECFELVIQHSN
General information:
TITO was launched using:
RESULT:
Template:
3GYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6016 for 444 contacts (13.5/contact) +
2D Compatibility (PS) -8739 + (NN) -10572 + (LL) 912
1D Compatibility (HY) -800 + (ID) 450
Total energy: -13633.0 ( -30.70 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3GYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GYZ-query.scw
PDB file :
Tito_Scwrl_3GYZ.pdb
: