Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLTNDDGYHAKGIKALEQALENMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNVFTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLKWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK |
| 4XER Chain:C ((16-257)) | --RILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGD---IAVQMGTPTDCVYLGVNALMRPRP-DIVVSGINAGPNLGDDVIYSGTVAAAMAGRHLGFPALAVSL-------NGYQHYDTAAAVTCALLRGLSRE--PLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPD----TDFAAVDEGYVSVTPLHVDLTAASAHDVVSDWLDSVGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79662 for 2000 contacts (-39.8/contact) +
2D Compatibility (PS) -25667 + (NN) -663 + (LL) 920
1D Compatibility (HY) -18400 + (ID) 4650
Total energy: -128122.0 ( -64.06 by residue)
QMean score : 0.397
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