Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIA-HEFAEGMRGMNR-EIYAVGARSLEKGQAFASQYGIE--NVYD--DFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEK-DPKNRF-YNMDLA-GGALLDIGTYALSFARYFLSETPDEVLTTMKKFETGVDEQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVGETSKALEYEITAMEESVATGENMTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 1OFG Chain:D ((32-233)) | ---FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEV------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94983 for 1330 contacts (-71.4/contact) +
2D Compatibility (PS) -20568 + (NN) -5405 + (LL) 10024
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -126882.0 ( -95.40 by residue)
QMean score : 0.515
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