Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGD-ETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGK--DADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLS-GEDLEKFERLIDALEDLEDVQKVYHNVELED------ |
1LFP Chain:A ((5-247)) | --SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEVGAE-DVQPGE-EVHIIYTVPEELYEVKENLEKLGVP-IEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFEIP-EEILQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 66348 for 1783 contacts (37.2/contact) +
2D Compatibility (PS) -24896 + (NN) -9050 + (LL) 180
1D Compatibility (HY) 7200 + (ID) 1850
Total energy: 37932.0 ( 21.27 by residue)
QMean score : 0.185
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