Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQD--INQGNSPLSYVGFRLIELEEDAVYQETL----DGLEC-CIVALTGKISVSEGDHVFSEIGTRANVFEKI-----PTDSVFISGGRAFQVKADAEKARVALCYSPADRNLPTTLIKAS-D-NS----I-EQRGKY------QNKRLVHNILPDVSEVASSLLVVE--------------VYTDGG-NFSSYPPHKHDHDNLPAESLLEESYYH----------EINPKQGFIFQ------R-VYTDDRALDETMAVEHQN---AVIVPEGYHPVGVPDGYDSYYLNVMAG----PKRVWEFHNDP---DHEWILERD--- |
| 3DSM Chain:A ((1-327)) | -------------ASGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWD---YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIPGAFCWKLEHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30169 for 1713 contacts (-17.6/contact) +
2D Compatibility (PS) -27988 + (NN) -4231 + (LL) 1292
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -70996.0 ( -41.45 by residue)
QMean score : 0.225
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