Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKFFLESERLIIRPLEE-SDYDSWYTSFMNRGPSLTPFDDGILDMSMCDINWFKNLVNLQRKEWESDIVYIFGVFLKSGEHVGMLNIVTLARADMQWGELGYVFHNQFWSNGYAFESILALLNSTYEKLGFHHIEAQITPGNERSENLVRRLGLTYETTRKDFSFENGKWTDKLIYSINLHNNNLE
2ZW5 Chain:A ((9-179))
--TAHLRTARLELTPLDPAADARHLHH-A-YGDEEVMRWWTRPAC---ADPAETERYLTSCAA---APGARLWTIRAPDGTVPGMAGLLGG----TDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLT
General information:
TITO was launched using:
RESULT:
Template:
2ZW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99477 for 1344 contacts (-74.0/contact) +
2D Compatibility (PS) -18810 + (NN) -9448 + (LL) 1372
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -127863.0 ( -95.14 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_2ZW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZW5-query.scw
PDB file :
Tito_Scwrl_2ZW5.pdb
: