Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEADSVELSLVRQGATINIEMIDNGCGFTN------------------LDGDEFHSIQERLTIVEGTLTILSRSK-PTHIQVVLKEV |
| 1ID0 Chain:A ((24-144)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGVNISLDISPE--ISFVGEQNDFVEVMGNVLDNACKYCLE-FVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ID0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40566 for 743 contacts (-54.6/contact) +
2D Compatibility (PS) -11197 + (NN) -2874 + (LL) 23120
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -34317.0 ( -46.19 by residue)
QMean score : 0.494
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