Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVKQERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIEDNIFRIGQEFISNTLKHSQ-------------ASRLEVYLNQTENELQLKMIDNGIGFDMDS----------------------------------VYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
1B3Q Chain:A ((98-250)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS----GVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRLPLTLAIICALL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32867 for 634 contacts (-51.8/contact) +
2D Compatibility (PS) -9740 + (NN) 2980 + (LL) 21676
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -24351.0 ( -38.41 by residue)
QMean score : 0.409
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