Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGRLIALGLVSLGALELYKNR---KTIKDSYQNTKIETDSAKLKLERIKNDLAIISQEKEK-IRLISQELN-HKFQVFNKDIQPR------LEEINQRMAK------------YQEKDE |
| 1LY7 Chain:A ((90-210)) | MDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7632 for 609 contacts (12.5/contact) +
2D Compatibility (PS) -10383 + (NN) -922 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -7823.0 ( -12.85 by residue)
QMean score : 0.244
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