Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLPLEICLTA-GFLDREQLHQLKQAGIDRINHNLNTPEENYPNIATTH--SFKDRCDTLERIHNEDIDVCSGFICGMGESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAG----REVHFENFESLVTLL--VDSTFLGN----YLTEGGRN------QHTDIEFLEKLQLNHTKKELI--------------------------- |
| 1TV8 Chain:A ((3-329)) | -------------------------------------------EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRIT-GGEPLMRRDLDVLIAKLNQIDG--IEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKH---IEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123377 for 2073 contacts (-59.5/contact) +
2D Compatibility (PS) -30750 + (NN) -17550 + (LL) 3920
1D Compatibility (HY) -10800 + (ID) 2200
Total energy: -180757.0 ( -87.20 by residue)
QMean score : 0.454
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