Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLS-----------PHKAKTIINQNHLTNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSRK-------------------------------------------------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 3V48 Chain:A ((12-258)) | ---------------------------------------------------------YADAPVVVLISGLGGSGSYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP-DSQKMVMPYGGHACN----------------VTDPETFNALLLNGLA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70248 for 1339 contacts (-52.5/contact) +
2D Compatibility (PS) -17206 + (NN) -5957 + (LL) 5308
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -94603.0 ( -70.65 by residue)
QMean score : 0.449
|
|
|