Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGG---QAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGNELGAGPWFRELRDMGLDAVIVSDPALIVICATEAPGLEIHLSTQASSTNYETFEFWKEMGLTRVVLAREVTMAELAEIRKRTDVEIEAFVHGAMCISYSGRCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSLKIEGRMKSIHYVSTVTNCYKAAVDAYMESPEAFEAIKED-------LIDELWKVAQRELATG--FYYHTPTENEQLFGARRKIPQYKFVGEVVSFDNAKMEATIRQRNVIMEGDRVEFYGPGFRHFECFIDGLRDAEGNKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA |
| 2B3Z Chain:A ((13-371)) | -MEEYYMKLALDLAKQGEG-QTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKT---PPCAELIINSGIKRVFVA------------------MRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITS----------------------------------EAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEG-IMSVYVEGGSAVHGSFVKEGCF--QEIIFYFAP------------KLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46525 for 2811 contacts (-16.6/contact) +
2D Compatibility (PS) -36829 + (NN) -5248 + (LL) 4620
1D Compatibility (HY) 1600 + (ID) 2400
Total energy: -84782.0 ( -30.16 by residue)
QMean score : 0.258
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