Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNE------------------------KTTPKALEILKRYNAKATFFVMGQSAVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVT---GLK----------------------EMLWSVDTEDWKNH-------------NTQAMMTNI---KKQL-R-PG-GVILMHDIH---QTSIDALPTIMDYLITQ-GYYFVTVGELYSTP |
| 3RXZ Chain:A ((24-279)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAVAFTFDVDAESPLLTTDPAFADRMGTMSHQAYGPLVGVPRLLGILDEFNVPGTFFVPGYTAHRHPEPIRSIARAGHEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPMWEMNWHTPKLLAEFGFLYDSTLMDSDHPYELAVGDGSLVELPVSWALDDWQQYCFVPDFSGTGLIETPAKAIELWRAELNAMRDIGGAWVLTNHPFLSGRPGRAAALREFIAEVCAMDDVWVAGMSQIAEHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51459 for 1449 contacts (-35.5/contact) +
2D Compatibility (PS) -19962 + (NN) -10667 + (LL) 18288
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -75800.0 ( -52.31 by residue)
QMean score : 0.456
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