Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKLSVL---------DYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGV------KAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGL--------GNSLGTVKVSNALRSLHKAHDYEEVLEEL-KSW-------------LIDKSSSKEPLVQPTLSSF-------------PDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPTIEEANHYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIP--------LVPGLDQRIKSLKLLSQLY--------------- |
| 1TVL Chain:A ((3-432)) | RADFIQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEKSIPHFLNRFEPITILSALASVTKNIGLVGTFSTSFT-EPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEHTERYEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKYFQVEGPLNIGRSKQGEPVVFQAGSSETGRQFAAKNAD------AIFTHSNSLEETKAFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFA---------ELIPIENAVTEAKARNLTLREVAQEMAFPRTLFIGTPERVASLIETWFNAEAADGFIVGSDIPGTLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92713 for 2325 contacts (-39.9/contact) +
2D Compatibility (PS) -33702 + (NN) -13700 + (LL) 868
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -153347.0 ( -65.96 by residue)
QMean score : 0.476
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