Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNV---DNYAGHFTFG--QGEEELGIFGHLDVVPAGSGWDTDPYEPVIK---------------------DNRLYAR------G----SSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHGSTP-QEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDETNDDNTIALNFRYPQGTDAKTIQTKLEKLNGVE--------KVTLSD-HEHTPH-YVPMDDE-LVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLE-RGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 1FNO Chain:A ((2-405)) | -------------DKLLERFLHYVSLDTQSKSG--VRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNPI-PHGDIKVAFTPDEEVGK-GAKHFDVEA-F-GAQWAYTVDGGG---VGE------------------------------L---------------------------EFENFNAA-----SVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVPADEA-----PE-------------------TTEGYEGFYHLASMKGTV--DRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHITPEMKPIRGGTDGAQLSFMGLPCPNLFTGG-YNYHGKHEFVTLEGMEKAVQVIVRIAELTAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30718 for 3002 contacts (-10.2/contact) +
2D Compatibility (PS) -38281 + (NN) -16324 + (LL) 5988
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -90385.0 ( -30.11 by residue)
QMean score : 0.385
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