Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSGKKAIVFSLFGIAFGYFCHRMILLYDSLPNQPPIEKIAYLFSDGQKVLMQQPWEFGFTKRSLLAFVSGFLSMCLVYLYVSTGQKIYREGAEYGSARFGTRKEKR----FFYSKNPFNDTILAQDVRLTLLEKKSPKFDRNKNLIVI-GGSGAGKTFRFVKANLIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRTLTVYFNNTKGTGSRSDPFWDEASMTLVRAIAS-----YLVDFY-NPPGSAKEEAEQRRKRGCYPAFSEIGKLIKLLSKGDNQDKSVLEVMFEEYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDVTKRDTLDLKTWGTQKTMVYLVI-PDNDTTFRFLSALFFSTVFSTLTRQADVDFKGKLPIHVRSYLDEFPNIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLGGNDEETFKFMSALLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGRMRRDECLVRIAGVPVFRSKKYLPTRHKNWKLLAEKETDDRWCHYHINPLSHDEPLDLFDHKMRDLTAETTLH |
| 4C1N Chain:A ((1-442)) | -----GLTGLEIYKHLPKKNCKEC--------GQPTCLAFAMQIAAGKAGLDACPYVSDEAKELLESASAPPVAL----IKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAILVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREVTDLPFILIGT---PEQLAAALETEGANNPLLYAATADN-----YEQMVELAKKYNVPLTVSAKG------------LDALAELVQKITALGYKNLILDPQPENISEGLFYQTQIRRLAIKKLFRPFGYPTIAFALDENPYQAVMEA--SVYIAKYA---------------------GIIVLNTV--EPADILPLITLRLNIYTDPQKPIAVEPKVYEILNPGPD------APVFITTNFSLTYFCVAGDVEGA----------------RIP-------------AYILPV------------------------DT----DG--------TSVLTAWA---------------AGKFTPEKIAQFLKESGIAEKVNHRKAIL-PGGVAVLSGKLQELS---GWEILV----------------GPRESSGINSFIKQRW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100087 for 3495 contacts (-28.6/contact) +
2D Compatibility (PS) -46722 + (NN) -21048 + (LL) 10320
1D Compatibility (HY) -8000 + (ID) 4250
Total energy: -169787.0 ( -48.58 by residue)
QMean score : 0.255
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