Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACIIRRARLGDEVNLAYIQTESWKAA----FGKILPEDIIQKTTE-I-E-PAITMYQQLLHKEVGKGYILEVDSNPHCMAWWDKSREDGMLDYAELICIHSLKEGWGKGYGSQMMNHVLSEIQQAGYNKVILWVFTENTRARKFYDRFGFSFKGKSKTYFEKEEMCYEKILH
1Z4E Chain:A ((4-148))
-HVTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVR-AFKEIKKDKNNELIV-ACNGEEIVGMLQVTFTPYL-------TYQ--GSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHEGLKMHF-----------
General information:
TITO was launched using:
RESULT:
Template:
1Z4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61145 for 937 contacts (-65.3/contact) +
2D Compatibility (PS) -14804 + (NN) -1300 + (LL) 1924
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -78125.0 ( -83.38 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4E-query.scw
PDB file :
Tito_Scwrl_1Z4E.pdb
: