Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDK-AKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKK-NLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKP-SDAIFVEK-SDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDT-----------SADIPQW----- |
| 1P99 Chain:A ((40-294)) | ---------------------------------KVTIGV---ASNDTKAWEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVN---DKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57212 for 1922 contacts (-29.8/contact) +
2D Compatibility (PS) -24490 + (NN) -3733 + (LL) 3072
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -106713.0 ( -55.52 by residue)
QMean score : 0.444
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