Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALAIDDKLFLFYTGNVRDMKWNRDPRQIGAWMTSDG---KITKFDKVLISQPNDVTEHFRDPQIFNYDNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVKGKPVLLYSPQGLDKNELDYQNIYPNTYKIGQYFDANSSKIVEPSPIYNLDYGFEAYATQGFNTSDGRAFIVSWIGLP--DIDYPSDQFDYQGAMSLVKELSIKNGNLYQYPVPAMKNLRQHQAEFKTQLQTN------NTYELELLVPRNDLSSFVLFANPKGQGLSITIDTAKGKVIVDRSQAGQQYATEFGTSRQCNIPKDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKEGHVHGKYFELKY--- |
| 1UYP Chain:A ((1-432)) | ------------------------------LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPD--DETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGEWRMVLGSGKDEKIGRVLLYTS--DDLFHWKYEGAIFEDETT--KEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGL--------------LDHGTDFYAAQTFF-GTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFLLDVKENSYEIVCEFS------GEIELRMGNESEEVVITKSRDELIVDTTRSGV---SGGEVRKSTVEDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHPENVYNILSVKSNQVKLEVFELENIWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107489 for 3630 contacts (-29.6/contact) +
2D Compatibility (PS) -45001 + (NN) -8689 + (LL) 3268
1D Compatibility (HY) -20000 + (ID) 5650
Total energy: -183561.0 ( -50.57 by residue)
QMean score : 0.380
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