Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MEENMNIKQLKSKTMLGTVALVSAFSFASTNADANTYNYAVDVDYLASAEEIAQAHPASNTFPLGQCTWGVKEMATWAGNW----WGNGGDWAASAASAGYTVGTQ-----PRVGSIVCWTDG---SYGHVAYVTAVDPVTNKIQVLESNYAGHQWIDNYRGWFDPQNTATPGVVSYIYPN--
4OLK Chain:A ((4-167))
MAKTQAEINKRLDAYAKGTVD--------------SPYRIKKATSYDPSFGVMEAGAIDADGYYHAQCQDLITDYVLWLTDNKVRTWGNAKDQIKQSYGTGFKIHENKPSTVPKKGWIAVFTSGSYQQWGHIGIVYDGGN-TSTFTILEQNWNG-----YANKKPTKRVDNYYGLTHFIEIPVK
General information:
TITO was launched using:
RESULT:
Template:
4OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49679 for 1167 contacts (-42.6/contact) +
2D Compatibility (PS) -16133 + (NN) -6167 + (LL) 1660
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -75019.0 ( -64.28 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OLK-query.scw
PDB file :
Tito_Scwrl_4OLK.pdb
: