Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVIILIIVLASLTVTIISYQKMTELTKSVEKQLEDNADNLSDQLTYQIEAAQKDQILTLTNQLNRMQQEIYQLLTDMRTELNQHLTESRDRSDKRLELINSNLSQSVQKMQDSNEKRLDQMRQTVEEKLEKTLQTRLQTSFETVSRQLESVNQGLGEMKTVAQDVGTLNKVLSN-TKTRGILGELQLGQIIEDIMTVSQYEREFPTVSGSSERVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLEDAYELGDKVQIELYRKSLLASIRKFAKDINNKYLNPPETTNFGIMFLPTEGLYSEVVRNATF---FDSLRRDENIVVAGP-------STLSALLNSLSVGFKTLNIQKNANDISKILGNVKVEFGKFGGMLSKAQKQLNTASKSIDNLLTTRTNAIIRALNTVEEHQDQATTSLLNLPITEEEEINEN- |
| 1LGR Chain:? ((101-468)) | -------------------DRDPRSIAKRAEDYLRA--TGIADTVLFGPEP---EFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPV---DS----AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGD--------------NGSGMHCHMSLAKNG-----------TNLFSGDKYAGLS------------EQALYYIGGVIKHAKAIN--ALANPTTNSYKRLVPPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDIPQVAGS-----------LEEALNALDLDR----EFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24463 for 2765 contacts (8.8/contact) +
2D Compatibility (PS) -35011 + (NN) -5428 + (LL) 7104
1D Compatibility (HY) -4800 + (ID) 2950
Total energy: -16622.0 ( -6.01 by residue)
QMean score : 0.171
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