Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MKSRKKDKLVLRLTTTLLVFGLGGVWFYNYKNDNVEPTVTSA---SDQTTTFIQTISPTAIEISKTYDLYASVLLAQAILESSSGQSDLSKA---PNYNLFG----IKGEY---KGKSVQM--------------PTLEDDGKGNMTQIQAPFRAYPNYSASLYDYAELVSSQKYASVWKSNTSSYKDATAALT--GLYATDTAYASKLNQIIETYSLDAYDK--------------------- |
| 4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHRE--VLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVLALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32019 for 1196 contacts (-26.8/contact) +
2D Compatibility (PS) -19817 + (NN) 6802 + (LL) 240
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -56694.0 ( -47.40 by residue)
QMean score : 0.219
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