Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRPVLEDKEEILAMYKEFQKESSSVDGGFYEPTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLKLGIEQAHL-KNINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT
1S7K Chain:A ((11-156))
LELRAADESHVPALHQLVLKN-----------------TRKHVQGNILLHQ--------RGYAKMYLIFCQNEMAGVLSFNAIEPI---NKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGD
General information:
TITO was launched using:
RESULT:
Template:
1S7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28708 for 857 contacts (-33.5/contact) +
2D Compatibility (PS) -13857 + (NN) -10265 + (LL) 748
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -58982.0 ( -68.82 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1S7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7K-query.scw
PDB file :
Tito_Scwrl_1S7K.pdb
: