Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
2RNJ Chain:A ((143-192))
---------------------------------------------------------------------------------------ELYEMLTEREMEILLL-IAKGYSNQE----IA-SASHITIKTVKTHVSNILSKLEV------
General information:
TITO was launched using:
RESULT:
Template:
2RNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4622 for 315 contacts (-14.7/contact) +
2D Compatibility (PS) -5155 + (NN) -1360 + (LL) 8900
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -4987.0 ( -15.83 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2RNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RNJ-query.scw
PDB file :
Tito_Scwrl_2RNJ.pdb
: