Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNVKKHHLAYGAITLVALFSCILAVMVIFKSSQVTTESLSKADKVRVAKKSKMTKATSKSKVEDVKQAPKPSQASNEAPKSSSQSTEANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGNTAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPNVANASGASGLFQTMPGWGSTA------------TVQDQVNSAIKAYRAQGLSAWGY |
3EO5 Chain:A ((283-354)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------SIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9090 for 384 contacts (-23.7/contact) +
2D Compatibility (PS) -6275 + (NN) -447 + (LL) 12400
1D Compatibility (HY) -400 + (ID) 850
Total energy: -4662.0 ( -12.14 by residue)
QMean score : 0.310
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