Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKIPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPAQ-GKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN
3STJ Chain:A ((11-334))--------------------------------------------------PLPSLAPMLEKVLPAVVSVRVEGT-------------------------QPFEGLGSGVIINA--SKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLG--QTATSGIVSALGRSGLNL-----EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPG----------GGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADI---AKAFNLD--VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS-----------


General information:
TITO was launched using:
RESULT:

Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102211 for 2607 contacts (-39.2/contact) +
2D Compatibility (PS) -32040 + (NN) -9920 + (LL) 3280
1D Compatibility (HY) -18000 + (ID) 5350
Total energy: -164241.0 ( -63.00 by residue)
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3STJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3STJ-query.scw
PDB file : Tito_Scwrl_3STJ.pdb: