Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKIPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPAQ-GKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
3STJ Chain:A ((11-334)) | --------------------------------------------------PLPSLAPMLEKVLPAVVSVRVEGT-------------------------QPFEGLGSGVIINA--SKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLG--QTATSGIVSALGRSGLNL-----EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPG----------GGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADI---AKAFNLD--VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102211 for 2607 contacts (-39.2/contact) +
2D Compatibility (PS) -32040 + (NN) -9920 + (LL) 3280
1D Compatibility (HY) -18000 + (ID) 5350
Total energy: -164241.0 ( -63.00 by residue)
QMean score : 0.511
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