Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINS--DFDLLVVTVKQHQLQSVFSSLERI--GKTNILFLQNGMGHI-------------------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQ-HNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRILKLENEE--KAWERVQAVCGQTKENRSSMLVDVIGGRQTEADAIIGYLLKEASLQGLDAVHLEFLYGSIKALERNTNKVF
3GHY Chain:A ((0-325))SLTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAFKTSMLQR----GPLEIDALVASVREIGLHVGVPTPQIDTLLGLVRLHAQTRGLY-


General information:
TITO was launched using:
RESULT:

Template: 3GHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1537 -238608 -155.24 -814.36
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -155.24
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3GHY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GHY-query.scw
PDB file : Tito_Scwrl_3GHY.pdb: