Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATT--DLVINSFLNIGIEKLTEGKRCFV-NFTESLMFSNLPTSFNPKQLVIEILEDIP-------ITPALISRCKELKKMGYMLALDDFYAINP--QDEDLLEKLMSYID---------ILKIDFL--------KTTRMERRTILQTYGCRGLIFLA--EKVETRKEYKQAVQDGFQLFQGYFFSEPRIISGHDLSTHFYSYYELL--NELSKEQPNIKRVTEYIERDLSLSYQILKFLNSSHSRLSQKIESIQQA--------IMLLGFNEIKRWIY-----ILSFKDLSRKGHS----SKHEIIKISLIRAKLCELL---------ARKTSRPQPASYMLIGMFSLIDTL------LHREIEEIVQELP--LKDEVGQALLGHQNDYYQMLE--LVKLIE--SNNWDTCSELGNQLDKE----EAYECYLEALEWCHNLMDAK--------
5DSE Chain:A ((140-843))VIAEAYATKGLCLEDVITCYEKAGDIALLYLQEIERVLGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPFCPQENTEEALLLLLISESMANRSVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDD-ANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLQSLCRGPDEALLTCKHMLQIWKSCYLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL


General information:
TITO was launched using:
RESULT:

Template: 5DSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1836 -41858 -22.80 -102.59
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -22.80
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_5DSE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DSE-query.scw
PDB file : Tito_Scwrl_5DSE.pdb: