Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVRFLQISDLHFQFQNYD----------TIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGD-VYNEDVKEYLNGIIKSMGLSKNNVHLVPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNILVEGQRKFFDFYEDFMGVKYPEEDLHFLY-QSEKYNVLSINTCLLSDKKGEEGTLLTAQMKLYKAIRKMNKEKNKGKVLNIAIGHHTLGCIESSER-ESIKAHFDDYFIDLYLAGHVHDSSFNITANTNENPFLELVSGAIIKD----EYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQGGRRLQEGKLNYKINRLESLIEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDNQIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSYVSADKKELIAETIVDKYLEFHNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKND
3THO Chain:B ((1-251))--MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEA----EKREVDLILLTGDLLHSRNNPSVVA-LHDLLDYLKRMM-RTAPVVVLPGNQDWKGLKLFGNF----------------------VTSISS--DI-TFVM--SFE-----PVDVEAKRGQKVRILPFPYPDES---KNEGD--FRFFLESRLNKLYEEAL-KKEDFAIFMGHFTVEGLAG--REIIINRALIPSVVDYAALGHIHSFREIQ-K----QP-LTIYPGSLIRIDFGEEADEKGAVFVELKRG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3THO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1123 23316 20.76 104.55
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 20.76
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3THO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3THO-query.scw
PDB file : Tito_Scwrl_3THO.pdb: