Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLAAVHDDPS-W-TAREALYQYTVRLLTAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGLIDRGIASGEFYEC-DSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET
4W97 Chain:A ((4-197))
----VAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDE-A--QRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGITK----------------
General information:
TITO was launched using:
RESULT:
Template:
4W97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91125 for 1401 contacts (-65.0/contact) +
2D Compatibility (PS) -20799 + (NN) -10130 + (LL) 932
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -133922.0 ( -95.59 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_4W97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W97-query.scw
PDB file :
Tito_Scwrl_4W97.pdb
: