Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAEL--GVYAVCVSPSMVPVA---VQAGG---VRVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDI---EAVRAAAAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAET-----VGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS
1JCL Chain:B ((15-217))
------------LMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGN-EQVGFDLVKACKEACAAANVLLKVIIETGELKDEA---LIRKASEISIKAGADFIKTSTG-KVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1JCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101665 for 1523 contacts (-66.8/contact) +
2D Compatibility (PS) -21271 + (NN) -11310 + (LL) 2172
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -147624.0 ( -96.93 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1JCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JCL-query.scw
PDB file :
Tito_Scwrl_1JCL.pdb
: