Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKAQRHQRRIDILAEYERTHEAPPVPGAPA
1USL Chain:D ((10-167))
-SGMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKAQRHQRRIDILAEYERTHEAPPVPG---
General information:
TITO was launched using:
RESULT:
Template:
1USL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84682 for 1459 contacts (-58.0/contact) +
2D Compatibility (PS) -17719 + (NN) -14863 + (LL) 356
1D Compatibility (HY) -18000 + (ID) 7850
Total energy: -142758.0 ( -97.85 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1USL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1USL-query.scw
PDB file :
Tito_Scwrl_1USL.pdb
: