Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAINLELPRKLQAIIVKTHQGAAEMMRPIARKYDLKEHAYPVELDTLINLFEGAAESFNFAGAHSLRDEDEGKDENHNGANMA---AVVQTMEASWGDVAMMLSLPYQGLGNAAISAVATDEQLER-LGK-----VWAAMAITEPEFGSDSAAVSTTATLDGDEYVINGEKIFVTAGSRATHIVVWATLDKSLGRPAIKSF---IVPREHPGVTVERLEHKLGIKGSDTAVIRFDNARIPKGNLLGNPEIEVGKGFAGVMETFDNTRPIVAAMAVGIGRAALEEIRSVLTGAGVEISYDKPSHTQSAAAAEFLRMEADWEASYLLSLRAAWQADNNIPNSKEASMSKAKAGRMASDVTCKTVELAGTTGYSEQSLLEKWARDSKILDIFEGTQQIQQLVVARRLLGLSSSELK |
| 2A1T Chain:B ((35-413)) | LGFSFEFTEQQKEFQATARKFAREEIIPVAAEYD-KTGEYPVPLIR-------RAWELGLMNTHI--------PENCGGLGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVL----IGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKY---ALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91133 for 3189 contacts (-28.6/contact) +
2D Compatibility (PS) -40030 + (NN) -17591 + (LL) 1424
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -172880.0 ( -54.21 by residue)
QMean score : 0.416
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