Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETFTKGMARNIYFGGSVFFILLFLALTYHTEKTLPERTNEAAMSAAVVRGKLVWEQNNCVGCHTLLGEGAYFAPELGNVVGRRGGE---------------EGFNTFLQAWMNIQPLNVPGRRAMPQFH-LSEGQVDDLAEFLKWSSKIDTNQWPPNKEG
3M97 Chain:X ((40-140))
--------------------------------------------ASADPAAGEKVF-G-KCKACHKLDGND-GVGPHLNGVVGRTVAGVDGFNYSDPMKAHGGDWTPEALQEFLTNPKAVVKG-TKMAFAGLPKIEDRANLIAYLEGQQ-------------
General information:
TITO was launched using:
RESULT:
Template:
3M97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21835 for 563 contacts (-38.8/contact) +
2D Compatibility (PS) -9011 + (NN) -5176 + (LL) 3888
1D Compatibility (HY) -800 + (ID) 1100
Total energy: -34034.0 ( -60.45 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3M97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M97-query.scw
PDB file :
Tito_Scwrl_3M97.pdb
: