Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEQIGNGVALVTGASSGIGATYAEHLARRGHDLLL--------VARDRQRLEALADRLRQAHGVRVEILRADLSE-RDDRLRVERRLRDDASIALLVNNAGVAMNGPLADADMDRAERMIALNVVALTRLAAGAAEGFRRRGGGAIVNLGSVVALAPELFNAVYSATKAYVLSLSQSLQHELAGSGVYVQAVLPGVTRTEIWERSGTGIAGIPAEMVMEVEDLVEAALVGFDRREAVTIPSLPDAADWQALMTARARLAPNLSRQRPAERYLG |
3VDR Chain:B ((7-195)) | ---------AVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLES-------KFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEK--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79330 for 1431 contacts (-55.4/contact) +
2D Compatibility (PS) -19494 + (NN) -5390 + (LL) 6292
1D Compatibility (HY) -12000 + (ID) 3050
Total energy: -112972.0 ( -78.95 by residue)
QMean score : 0.527
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