Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3MXC Chain:A ((4-101))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59224 for 671 contacts (-88.3/contact) +
2D Compatibility (PS) -10577 + (NN) -7147 + (LL) 5928
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -89520.0 ( -133.41 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_3MXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MXC-query.scw
PDB file :
Tito_Scwrl_3MXC.pdb
: