Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
3LR9 Chain:A ((1-152))
-GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGFQ-
General information:
TITO was launched using:
RESULT:
Template:
3LR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69409 for 1104 contacts (-62.9/contact) +
2D Compatibility (PS) -16611 + (NN) -11248 + (LL) 36
1D Compatibility (HY) -17200 + (ID) 6700
Total energy: -121132.0 ( -109.72 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3LR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LR9-query.scw
PDB file :
Tito_Scwrl_3LR9.pdb
: