Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
4M7M Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIWVAAASKPAVEIKQEGDTFYIKVSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTKELTNDGELILTMTADDVVCTQVFVRE
General information:
TITO was launched using:
RESULT:
Template:
4M7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37760 for 957 contacts (-39.5/contact) +
2D Compatibility (PS) -15079 + (NN) -6046 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -80027.0 ( -83.62 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4M7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M7M-query.scw
PDB file :
Tito_Scwrl_4M7M.pdb
: