Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3LBN Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3LBN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96746 for 1380 contacts (-70.1/contact) +
2D Compatibility (PS) -18414 + (NN) -5403 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 8300
Total energy: -151575.0 ( -109.84 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_3LBN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LBN-query.scw
PDB file :
Tito_Scwrl_3LBN.pdb
: