Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
3GFT Chain:A ((19-185))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGHEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100248 for 1372 contacts (-73.1/contact) +
2D Compatibility (PS) -18397 + (NN) -5427 + (LL) 1872
1D Compatibility (HY) -22800 + (ID) 8050
Total energy: -153050.0 ( -111.55 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3GFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFT-query.scw
PDB file :
Tito_Scwrl_3GFT.pdb
: