Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLPGHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3LG4 Chain:A ((2-158))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHYKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIIGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3LG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122488 for 1140 contacts (-107.4/contact) +
2D Compatibility (PS) -16788 + (NN) -3247 + (LL) 272
1D Compatibility (HY) -23200 + (ID) 7650
Total energy: -173101.0 ( -151.84 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3LG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LG4-query.scw
PDB file :
Tito_Scwrl_3LG4.pdb
: