Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEK-EKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYY-DKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 4KNN Chain:B ((6-262)) | ---------------------SWGYREHNGPIHWKEFFP-----IADGDQQSPIEIKTKEVKYDSSLRPLSIK-YDPSSAKIISNSGHSFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWNSDK--YPSFVEAAHEPDGLAVLGVFLQIGE-PNSQLQKITDTLDSIKEKGKQTRFTNFDLLSLLPPS--W-DYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQPLKGRKVRASF--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96327 for 2073 contacts (-46.5/contact) +
2D Compatibility (PS) -26880 + (NN) -6997 + (LL) 4040
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -145864.0 ( -70.36 by residue)
QMean score : 0.297
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