Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
2DG4 Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGFEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
2DG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51321 for 790 contacts (-65.0/contact) +
2D Compatibility (PS) -11986 + (NN) -6852 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5150
Total energy: -88701.0 ( -112.28 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_2DG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DG4-query.scw
PDB file :
Tito_Scwrl_2DG4.pdb
: