Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRASNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM
1XK1 Chain:A ((10-223))
---------PQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSHGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYESRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTH-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113095 for 1643 contacts (-68.8/contact) +
2D Compatibility (PS) -23740 + (NN) -20364 + (LL) 4096
1D Compatibility (HY) -29200 + (ID) 10600
Total energy: -192903.0 ( -117.41 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1XK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XK1-query.scw
PDB file :
Tito_Scwrl_1XK1.pdb
: