Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
4F2K Chain:A ((1-114))
-PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
General information:
TITO was launched using:
RESULT:
Template:
4F2K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96970 for 804 contacts (-120.6/contact) +
2D Compatibility (PS) -13057 + (NN) -11086 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5700
Total energy: -143005.0 ( -177.87 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_4F2K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F2K-query.scw
PDB file :
Tito_Scwrl_4F2K.pdb
: