Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQ-KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
3F3M Chain:A ((1-158))
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLK-----GTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKK--
General information:
TITO was launched using:
RESULT:
Template:
3F3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107710 for 1175 contacts (-91.7/contact) +
2D Compatibility (PS) -16041 + (NN) -5688 + (LL) 252
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -149537.0 ( -127.27 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_3F3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F3M-query.scw
PDB file :
Tito_Scwrl_3F3M.pdb
: